School of Molecular Biosciences

Seale, M., Zhdanov, O., Soons, M. B., Cummins, C., Kroll, E., Blatt, M. R., Zare-Behtash, H., Busse, A., Mastropaolo, E., Bullock, J. M., Viola, I. M., Nakayama, N. (2022) Environmental morphing enables informed dispersal of the dandelion diaspore eLife, 11, (doi: 10.7554/eLife.81962)

Elvers, I., Nguyen Phan, T. C., Gardiner, A. T., Hunter, C. N., Cogdell, R. J., Köhler, J. (2022) Phasor analysis reveals multicomponent fluorescence kinetics in the LH2 complex from Marichromatium purpuratum Journal of Physical Chemistry B, 126, pp. 10335-10346. (doi: 10.1021/acs.jpcb.2c04983)

Duan, H.-G., Jha, A., Chen, L., Tiwari, V., Cogdell, R. J., Ashraf, K., Prokhorenko, V. I., Thorwart, M., Miller, R. J. D. (2022) Quantum coherent energy transport in the Fenna–Matthews–Olson complex at low temperature Proceedings of the National Academy of Sciences of the United States of America, 119, pp. e2212630119. (doi: 10.1073/pnas.2212630119)

Kowalczyk, D., Nakasone, M. A., Smith, B. O., Huang, D. T. (2022) Bivalent binding of p14ARF to MDM2 RING and acidic domains inhibits E3 ligase function Life Science Alliance, 5, (doi: 10.26508/lsa.202201472)

Lieberman-Lazarovich, M., Kaiserli, E., Bucher, E., Mladenov, V. (2022) Natural and induced epigenetic variation for crop improvement Current Opinion in Plant Biology, 70, (doi: 10.1016/j.pbi.2022.102297)

Wu, F., Finkelstein-Shapiro, D., Wang, M., Rosenkampff, I., Yartsev, A., Pascher, T., Nguyen- Phan, T. C., Cogdell, R., Börjesson, K., Pullerits, T. (2022) Optical cavity-mediated exciton dynamics in photosynthetic light harvesting 2 complexes Nature Communications, 13, (doi: 10.1038/s41467-022-34613-x)

Horaruang, W., Klejchová, M., Carroll, W., Silva-Alvim, F. A.L., Waghmare, S., Papanatsiou, M., Amtmann, A., Hills, A., Alvim, J. C., Blatt, M. R., Zhang, B. (2022) Engineering a K+ channel 'sensory antenna' enhances stomatal kinetics, water use efficiency and photosynthesis Nature Plants, 8, pp. 1262-1274. (doi: 10.1038/s41477-022-01255-2)

Fang, W., Vellutini, E., Perrella, G., Kaiserli, E. (2022) TANDEM ZINC-FINGER/PLUS3 regulates phytochrome B abundance and signaling to fine-tune hypocotyl growth Plant Cell, 34, pp. 4213-4231. (doi: 10.1093/plcell/koac236)

Gracie, J., Zamberlan, F., Andrews, I. B., Smith, B. O., Peveler, W. J. (2022) Growth of plasmonic nanoparticles for aging cask-matured whisky ACS Applied Nano Materials, 5, pp. 15362-15368. (doi: 10.1021/acsanm.2c03406)

Miguel-Romero, L., Alqasmi, M., Bacarizo, J., Tan, J. A., Cogdell, R. J., Chen, J., Byron, O., Christie, G. E., Marina, A., Penadés, J. R. (2022) Non-canonical Staphylococcus aureus pathogenicity island repression Nucleic Acids Research, 50, pp. 11109-11127. (doi: 10.1093/nar/gkac855)

Qian, P., Nguyen-Phan, T. C., Gardiner, A. T., Croll, T. I., Roszak, A. P., Southall, J., Jackson, P. J., Vasilev, C., Castro-Hartmann, P., Sader, K., Hunter, C. N., Cogdell, R. J. (2022) Cryo-EM structures of light-harvesting 2 complexes from Rhodopseudomonas palustris reveal the molecular origin of absorption tuning Proceedings of the National Academy of Sciences of the United States of America, 117, (doi: 10.1073/pnas.2210109119)

Patitaki, E., Schivre, G., Zioutopoulou, A., Perrella, G., Bourbousse, C., Barneche, F., Kaiserli, E. (2022) Light, chromatin, action: nuclear events regulating light signaling in Arabidopsis New Phytologist, 236, pp. 333-349. (doi: 10.1111/nph.18424)

Rennie, M. L., Arkinson, C., Chaugule, V. K., Walden, H. (2022) Cryo-EM reveals a mechanism of USP1 inhibition through a cryptic binding site Science Advances, 8, (doi: 10.1126/sciadv.abq6353)

Ryan, S. M., Ruscher, R., Johnston, W. A., Pickering, D. A., Kennedy, M. W., Smith, B. O., Jones, L., Buitrago, G., Field, M. A., Esterman, A. J., McHugh, C. P., Browne, D. J., Cooper, M. M., Ryan, R. Y. M., Doolan, D. L., Engwerda, C. R., Miles, K., Mitreva, M., Croese, J., Rahman, T., Alexandrov, K., Giacomin, P. R., Loukas, A. (2022) Novel antiinflammatory biologics shaped by parasite–host coevolution Proceedings of the National Academy of Sciences of the United States of America, 119, (doi: 10.1073/pnas.2202795119)

Hogrel, G., Guild, A., Graham, S., Rickman, H., Grüschow, S., Bertrand, Q., Spagnolo, L., White, M. F. (2022) Cyclic nucleotide-induced helical structure activates a TIR immune effector Nature, 608, pp. 808-812. (doi: 10.1038/s41586-022-05070-9)

Lemonidis, K., Arkinson, C., Rennie, M. L., Walden, H. (2022) Mechanism, specificity and function of FANCD2‐FANCI ubiquitination and deubiquitination FEBS Journal, 289, pp. 4811-4829. (doi: 10.1111/febs.16077)

Caccavale, E., Johnson, M. P., Brijbassi, S., Andreazza, A. C., Tokatlidis, K. (2022) Mitochondria and Us: from exploration to global collective Biochemist, 44, pp. 22-28. (doi: 10.1042/bio_2022_122)

Liao, X., Jenkins, G. I. (2022) Cysteines have a role in conformation of the UVR8 photoreceptor Plant Journal, 111, pp. 583-594. (doi: 10.1111/tpj.15841)

Baena, G., Xia, L., Waghmare, S., Karnik, R. (2022) SNARE SYP132 mediates divergent trafficking of H+-ATPase AHA1 and antimicrobial PR1 during bacterial pathogenesis Plant Physiology, 189, pp. 1639-1661. (doi: 10.1093/plphys/kiac149)

Kjeldsen, A., Kay, J. E., Baxter, S., McColm, S., Serrano-Amatriain, C., Parker, S., Robb, E., Arnold, S. A., Gilmour, C., Raper, A., Robertson, G., Fleming, R., Smith, B. O., Fotheringham, I. G., Christie, J. M., Magneschi, L. (2022) The fluorescent protein iLOV as a reporter for screening of high‐yield production of antimicrobial peptides in Pichia pastoris Microbial Biotechnology, 15, pp. 2126-2139. (doi: 10.1111/1751-7915.14034)

Ledahawsky, L. M., Terzenidou, M. E., Edwards, R., Kline, R. A., Graham, L. C., Eaton, S. L., van der Hoorn, D., Chaytow, H., Huang, Y.‐T., Groen, E. J.N., Motyl, A. A. L., Lamont, D. J., Tokatlidis, K., Wishart, T. M., Gillingwater, T. H. (2022) The mitochondrial protein Sideroflexin 3 (SFXN3) influences neurodegeneration pathways in vivo FEBS Journal, 289, pp. 3894-3914. (doi: 10.1111/febs.16377)

Wang, Y., Karnik, R., Garcia-Mata, C., Hu, H. (2022) Editorial: transport and membrane traffic in stomatal biology Frontiers in Plant Science, 13, (doi: 10.3389/fpls.2022.898128)

Torres Cabán, C. C., Yang, M., Lai, C., Yang, L., Subach, F. V., Smith, B. O., Piatkevich, K. D., Boyden, E. S. (2022) Tuning the sensitivity of genetically encoded fluorescent potassium indicators through structure-guided and genome mining strategies ACS Sensors, 7, pp. 1336-1346. (doi: 10.1021/acssensors.1c02201)

Thu, N. B.A., Amtmann, A., Blatt, M. R., Nguyen, T.-H. (2022) Stomata under salt stress—what can mechanistic modeling tell us? Academic Press

Živković, D., Sanchez Dafun, A., Menneteau, T., Schahl, A., Lise, S., Kervarrec, C., Toste Rêgo, A., da Fonseca, P. C. A., Chavent, M., Pineau, C., Burlet-Schiltz, O., Marcoux, J., Bousquet, M.-P. (2022) Proteasome complexes experience profound structural and functional rearrangements throughout mammalian spermatogenesis Proceedings of the National Academy of Sciences of the United States of America, 119, pp. e2116826119. (doi: 10.1073/pnas.2116826119)

Tibbo, A. J., Mika, D., Dobi, S., Ling, J., McFall, A., Tejeda, G. S., Blair, C., MacLeod, R., MacQuaide, N., Gök, C., Fuller, W., Smith, B. O., Smith, G. L., Vandecasteele, G., Brand, T., Baillie, G. S. (2022) Phosphodiesterase type 4 anchoring regulates cAMP signaling to Popeye domain-containing proteins Journal of Molecular and Cellular Cardiology, 165, pp. 86-102. (doi: 10.1016/j.yjmcc.2022.01.001)

Zioutopoulou, A., Patitaki, E., O'Donnell, L., Kaiserli, E. (2022) Low fluence ultraviolet-B promotes ultraviolet resistance 8-modulated flowering in Arabidopsis Frontiers in Plant Science, 13, (doi: 10.3389/fpls.2022.840720)

Naqvi, S., He, Q., Trusch, F., Qiu, H., Pham, J., Sun, Q., Christie, J. M., Gilroy, E. M., Birch, P. R.J. (2022) Blue‐light receptor phototropin 1 suppresses immunity to promote Phytophthora infestans infection New Phytologist, 233, pp. 2282-2293. (doi: 10.1111/nph.17929)

Dunkerley, K. M., Rintala-Dempsey, A. C., Salzano, G., Tadayon, R., Hadi, D., Barber, K. R., Walden, H., Shaw, G. S. (2022) Distinct phosphorylation signals drive acceptor versus free ubiquitin chain targeting by Parkin Biochemical Journal, 479, pp. 751-766. (doi: 10.1042/bcj20210741)

Guarino, F., Cicatelli, A., Castiglione, S., Agius, D. R., Orhun, G. E., Fragkostefanakis, S., Leclercq, J., Dobránszki, J., Kaiserli, E., Lieberman-Lazarovich, M., Sõmera, M., Sarmiento, C., Vettori, C., Paffetti, D., Poma, A. M. G., Moschou, P. N., Gašparović, M., Yousefi, S., Vergata, C., Berger, M. M. J., Gallusci, P., Miladinović, D., Martinelli, F. (2022) An epigenetic alphabet of crop adaptation to climate change Frontiers in Genetics, 13, (doi: 10.3389/fgene.2022.818727)

Kim, J., Nguyen-Phan, T. C., Gardiner, A. T., Yoon, T. H., Cogdell, R. J., Cho, M., Scholes, G. D. (2022) Vibrational modes promoting exciton relaxation in the B850 band of LH2 Journal of Physical Chemistry Letters, 13, pp. 1099-1106. (doi: 10.1021/acs.jpclett.1c03868)

Blatt, M. R., Jezek, M., Lew, V. L., Hills, A. (2022) What can mechanistic models tell us about guard cells, photosynthesis, and water use efficiency? Trends in Plant Science, 27, pp. 166-179. (doi: 10.1016/j.tplants.2021.08.010)

Nakasone, M. A., Majorek, K. A., Gabrielsen, M., Sibbet, G. J., Smith, B. O., Huang, D. T. (2022) Structure of UBE2K-Ub/E3/polyUb reveals mechanisms of K48-linked Ub chain extension Nature Chemical Biology, 18, pp. 422-431. (doi: 10.1038/s41589-021-00952-x)

Neckebroeck, A., Kelly, S. M., Smith, B. O., Clark, J. S. (2022) Synthesis of the prototypical cyclopropyl dipeptide mimic and evaluation of its turn-inducing capability Journal of Organic Chemistry, 87, pp. 258-270. (doi: 10.1021/acs.joc.1c02344)

Yukihira, N., Uragami, C., Horiuchi, K., Kosumi, D., Gardiner, A. T., Cogdell, R. J., Hashimoto, H. (2022) Intramolecular charge-transfer enhances energy transfer efficiency in carotenoid-reconstituted light-harvesting 1 complex of purple photosynthetic bacteria Communications Chemistry, 5, (doi: 10.1038/s42004-022-00749-6)

Zhdanov, O., Blatt, M. R., Zare-Behtash, H., Busse, A. (2022) Unidirectional versus bidirectional brushing: simulating wind influence on Arabidopsis thaliana Quantitative Plant Biology, 3, (doi: 10.1017/qpb.2021.14)

Tokatlidis, K., Eaglesfield, R. (2021) Targeting and insertion of membrane proteins in mitochondria Frontiers in Cell and Developmental Biology, 9, (doi: 10.3389/fcell.2021.803205)

Blatt, M. (2021) Ae fond fareweel Plant Physiology, 187, pp. 2341-2343. (doi: 10.1093/plphys/kiab467)

Zioutopoulou, A., Patitaki, E., Xu, T., Kaiserli, E. (2021) The epigenetic mechanisms underlying thermomorphogenesis and heat stress responses in Arabidopsis Plants, 10, (doi: 10.3390/plants10112439)

Sullivan, S., Waksman, T., Paliogianni, D., Henderson, L., Lütkemeyer, M., Suetsugu, N., Christie, J. M. (2021) Regulation of plant phototropic growth by NPH3/RPT2-like substrate phosphorylation and 14-3-3 binding Nature Communications, 12, (doi: 10.1038/s41467-021-26333-5)

Prabhakar, A. T., James, C. D., Das, D., Otoa, R., Day, M., Burgner, J., Fontan, C. T., Wang, X., Wieland, A., Donaldson, M. M., Bristol, M. L., Li, R., Oliver, A. W., Pearl, L. H., Smith, B. O., Glass, S., Morgan, I. M. (2021) CK2 phosphorylation of human papillomavirus 16 E2 on serine 23 promotes interaction with TopBP1 and is critical for E2 interaction with mitotic chromatin and the viral life cycle mBio, 12, (doi: 10.1128/mbio.01163-21)

Jezek, M., Silva-Alvim, F. A.L., Hills, A., Donald, N., Ishka, M. R., Shadbolt, J., He, B., Lawson, T., Harper, J. F., Wang, Y., Lew, V. L., Blatt, M. R. (2021) Guard cell endomembrane Ca2+-ATPases underpin a ‘carbon memory’ of photosynthetic assimilation that impacts on water-use efficiency Nature Plants, 7, pp. 1301-1313. (doi: 10.1038/s41477-021-00966-2)

Buist, H. K., Luchowska-Stańska, U., van Basten, B., Valli, J., Smith, B. O., Baillie, G. S., Rickman, C., Ricketts, B., Davidson, A., Hannam, R., Sunderland, J., Yarwood, S. J. (2021) Identification and characterization of an affimer affinity reagent for the detection of the cAMP sensor, EPAC1 Cells, 10, (doi: 10.3390/cells10092307)

Geldon, S., Fernandez-Vizarra, E., Tokatlidis, K. (2021) Redox-mediated regulation of mitochondrial biogenesis, dynamics and respiratory chain assembly in yeast and human cells Frontiers in Cell and Developmental Biology, 9, (doi: 10.3389/fcell.2021.720656)

Kakoulidou, I., Avramidou, E. V., Baránek, M., Brunel-Muguet, S., Farrona, S., Johannes, F., Kaiserli, E., Lieberman-Lazarovich, M., Martinelli, F., Mladenov, V., Testillano, P. S., Vassileva, V., Maury, S. (2021) Epigenetics for crop improvement in times of global change Biology, 10, (doi: 10.3390/biology10080766)

Kim, J., Nguyen-Phan, T. C., Gardiner, A. T., Cogdell, R. J., Scholes, G. D., Cho, M. (2021) Low-frequency vibronic mixing modulates the excitation energy flow in bacterial light-harvesting complex II Journal of Physical Chemistry Letters, 12, pp. 6292-6298. (doi: 10.1021/acs.jpclett.1c01782)

Mladenov, V., Fotopoulos, V., Kaiserli, E., Karalija, E., Maury, S., Baranek, M., Segal, N., Testillano, P. S., Vassileva, V., Pinto, G., Nagel, M., Hoenicka, H., Miladinović, D., Gallusci, P., Vergata, C., Kapazoglou, A., Abraham, E., Tani, E., Gerakari, M., Sarri, E., Avramidou, E., Gašparović, M., Martinelli, F. (2021) Deciphering the epigenetic alphabet involved in transgenerational stress memory in crops International Journal of Molecular Sciences, 22, (doi: 10.3390/ijms22137118)

Morgan, D. C., Morris, C., Mahindra, A., Blair, C. M., Tejeda, G., Herbert, I., Turnbull, M. L., Lieber, G., Willett, B. J., Logan, N., Smith, B., Tobin, A. B., Bhella, D., Baillie, G. S., Jamieson, A. G. (2021) Stapled ACE2 peptidomimetics designed to target the SARS-CoV-2 spike protein do not prevent virus internalisation Peptide Science, 113, (doi: 10.1002/pep2.24217)

Diamantopoulou, C., Christoforou, E., Dominoni, D. M., Kaiserli, E., Czyzewski, J., Mirzai, N., Spatharis, S. (2021) Wavelength-dependent effects of artificial light at night on phytoplankton growth and community structure Proceedings of the Royal Society of London Series B: Biological Sciences, 288, (doi: 10.1098/rspb.2021.0525)

Gundogdu, M., Tadayon, R., Salzano, G., Shaw, G. S., Walden, H. (2021) A mechanistic review of Parkin activation Biochimica et Biophysica Acta. General Subjects, 1865, (doi: 10.1016/j.bbagen.2021.129894)

Morris, E. P., da Fonseca, P. C.A. (2021) How to build a proteasome Nature Structural and Molecular Biology, 28, pp. 409-410. (doi: 10.1038/s41594-021-00592-8)

van Beek, L., McClay, É., Patel, S., Schimpl, M., Spagnolo, L., Maia de Oliveira, T. (2021) PARP power: a structural perspective on PARP1, PARP2, and PARP3 in DNA damage repair and nucleosome remodelling International Journal of Molecular Sciences, 22, (doi: 10.3390/ijms22105112)

Klejchova, M., Silva-Alvim, F. A.L., Blatt, M. R., Alvim, J. C. (2021) Membrane voltage as a dynamic platform for spatio-temporal signalling, physiological and developmental regulation Plant Physiology, 185, pp. 1523-1541. (doi: 10.1093/plphys/kiab032)

Rennie, M. L., Arkinson, C., Chaugule, V. K., Toth, R., Walden, H. (2021) Structural basis of FANCD2 deubiquitination by USP1-UAF1 Nature Structural and Molecular Biology, 28, pp. 356-364. (doi: 10.1038/s41594-021-00576-8)

Rolczynski, B. S., Yeh, S.-H., Navotnaya, P., Lloyd, L. T., Ginzburg, A. R., Zheng, H., Allodi, M. A., Otto, J. P., Ashraf, K., Gardiner, A. T., Cogdell, R. J., Kais, S., Engel, G. S. (2021) Time-domain line-shape analysis from 2D spectroscopy to precisely determine Hamiltonian parameters for a photosynthetic complex Journal of Physical Chemistry B, 125, pp. 2812-2820. (doi: 10.1021/acs.jpcb.0c08012)

Christie, J. M., Zurbriggen, M. D. (2021) Optogenetics in plants New Phytologist, 229, pp. 3108-3115. (doi: 10.1111/nph.17008)

Perrella, G., Zioutopoulou, A., Hamilton, A., Kaiserli, E. (2021) Photobody detection using immunofluorescence and super-resolution imaging in Arabidopsis Humana

Edwards, R., Eaglesfield, R., Tokatlidis, K. (2021) The mitochondrial intermembrane space: the most constricted mitochondrial sub-compartment with the largest variety of protein import pathways Open Biology, 11, (doi: 10.1098/rsob.210002)

Zhdanov, O., Blatt, M. R., Zare-Behtash, H., Busse, A. (2021) Wind-evoked anemotropism affects the morphology and mechanical properties of Arabidopsis Journal of Experimental Botany, 72, pp. 1906-1918. (doi: 10.1093/jxb/eraa541)

Gardiner, A. T., Naydenova, K., Castro-Hartmann, P., Nguyen-Phan, C. T., Russo, C. J., Sader, K., Hunter, C. N., Cogdell, R. J., Qian, P. (2021) The 2.4 Å cryo-EM structure of a heptameric light-harvesting 2 complex reveals two carotenoid energy transfer pathways Science Advances, 7, (doi: 10.1126/sciadv.abe4650)

Zhang, B., Xia, L., Zhang, Y., Wang, H., Karnik, R. (2021) Tri-SUS: a yeast split-ubiquitin assay to examine protein interactions governed by a third binding partner Plant Physiology, 185, pp. 285-289. (doi: 10.1093/plphys/kiaa039)

Thyrhaug, E., Schröter, M., Bukartė, E., Kühn, O., Cogdell, R., Hauer, J., Zigmantas, D. (2021) Intraband dynamics and exciton trapping in the LH2 complex of Rhodopseudomonas acidophila Journal of Chemical Physics, 154, (doi: 10.1063/5.0033802)

Knuhtsen, A., Whiting, R., McWhinnie, F. S., Whitmore, C., Smith, B. O., Green, A. C., Timperley, C. M., Kinnear, K. I., Jamieson, A. G. (2021) μ-conotoxin KIIIA peptidomimetics that block human voltage-gated sodium channels Peptide Science, 113, (doi: 10.1002/pep2.24203)

Dimogkioka, A.-R., Lees, J., Tokatlidis, K., Lacko, E. (2021) Protein import in mitochondria biogenesis: Guided by targeting signals and sustained by dedicated chaperones RSC Advances, 11, pp. 32476-32493. (doi: 10.1039/D1RA04497D)

Dickson-Murray, E., Nedara, K., Modjtahedi, N., Tokatlidis, K. (2021) The Mia40/CHCHD4 oxidative folding system: Redox regulation and signaling in the mitochondrial intermembrane space Antioxidants, 10, (doi: 10.3390/antiox10040592)

Parry, G., Benitez-Alfonso, Y., Gibbs, D. J., Grant, M., Harper, A., Harrison, C. J., Kaiserli, E., Leonelli, S., May, S., McKim, S., Spoel, S., Turnbull, C., van der Hoorn, R. A.L., Murray, J. (2020) How to build an effective research network: lessons from two decades of the GARNet plant science community Journal of Experimental Botany, 71, pp. 6881-6889. (doi: 10.1093/jxb/eraa397)

Zhdanov, O., Blatt, M. R., Cammarano, A., Zare-Behtash, H., Busse, A. (2020) A new perspective on mechanical characterisation of Arabidopsis stems through vibration tests Journal of the Mechanical Behavior of Biomedical Materials, 112, (doi: 10.1016/j.jmbbm.2020.104041)

Waraich, N. F., Jain, S., Colloms, S. D., Stark, W. M., Burton, N. P., Maxwell, A. (2020) A novel decatenation assay for DNA topoisomerases using a singly-linked catenated substrate BioTechniques, 69, pp. 356-362. (doi: 10.2144/btn-2020-0059)

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de Rooij, P. G.H., Perrella, G., Kaiserli, E., van Zanten, M. (2020) The diverse and unanticipated roles of Histone deacetylase 9 in coordinating plant development and environmental acclimation Journal of Experimental Botany, 71, pp. 6211-6225. (doi: 10.1093/jxb/eraa335)

Chatrin, C., Gabrielsen, M., Buetow, L., Nakasone, M. A., Ahmed, S. F., Sumpton, D., Sibbet, G. J., Smith, B. O., Huang, D. T. (2020) Structural insights into ADP-ribosylation of ubiquitin by Deltex family E3 ubiquitin ligases Science Advances, 6, (doi: 10.1126/sciadv.abc0418)

Lefoulon, C., Boxall, S. F., Hartwell, J., Blatt, M. R. (2020) Crassulacean acid metabolism guard cell anion channel activity follows transcript abundance and is suppressed by apoplastic malate New Phytologist, 227, pp. 1847-1857. (doi: 10.1111/nph.16640)

Larson, E. R., Ortmannová, J., Donald, N. A., Alvim, J., Blatt, M. R., Žárský, V. (2020) Synergy among exocyst and SNARE interactions identifies a functional hierarchy in secretion during vegetative growth Plant Cell, 32, pp. 2951-2963. (doi: 10.1105/tpc.20.00280)

Perrella, G., Zioutopoulou, A., Headland, L. R., Kaiserli, E. (2020) The impact of light and temperature on chromatin organisation and plant adaptation Journal of Experimental Botany, 71, pp. 5247-5255. (doi: 10.1093/jxb/eraa154)

Mitxitorena, I., Somma, D., Mitchell, J. P., Lepistö, M., Tyrchan, C., Smith, E. L., Kiely, P. A., Walden, H., Keeshan, K., Carmody, R. J. (2020) The deubiquitinase USP7 uses a distinct ubiquitin-like domain to deubiquitinate NF-ĸB subunits Journal of Biological Chemistry, 295, pp. 11754-11763. (doi: 10.1074/jbc.RA120.014113)

Gardiner, A., Nguyen-Phan, T. C., Cogdell, R. J. (2020) A comparative look at structural variation among RC-LH1 ‘core’ complexes present in anoxygenic phototrophic bacteria Photosynthesis Research, 145, pp. 83-96. (doi: 10.1007/s11120-020-00758-3)

Jezek, M., Hills, A., Blatt, M. R., Lew, V. L. (2020) A constraint-relaxation-recovery mechanism for stomatal dynamics Plant, Cell and Environment, 42, pp. 2399-2410. (doi: 10.1111/pce.13568)

Liao, X., Liu, W., Yang, H.-Q., Jenkins, G. I. (2020) A dynamic model of UVR8 photoreceptor signaling in UV-B acclimated Arabidopsis New Phytologist, 227, pp. 857-866. (doi: 10.1111/nph.16581)

Rennie, M. L., Lemonidis, K., Arkinson, C., Chaugule, V. K., Clarke, M., Streetley, J., Spagnolo, L., Walden, H. (2020) Differential functions of FANCI and FANCD2 ubiquitination stabilize ID2 complex on DNA EMBO Reports, 21, (doi: 10.15252/embr.202050133)

Flütsch, S., Wang, Y., Takemiya, A., Vialet-Chabrand, S. R., Klejchova, M., Nigro, A., Hills, A., Lawson, T., Blatt, M. R., Santelia, D. (2020) Guard cell starch degradation yields glucose for rapid stomatal opening in Arabidopsis Plant Cell, 32, pp. 2325-2344. (doi: 10.1105/tpc.18.00802)

Perrella, G., Vellutini, E., Zioutopoulou, A., Patitaki, E., Headland, L. R., Kaiserli, E. (2020) Let it bloom: crosstalk between light and flowering signalling in Arabidopsis Physiologia Plantarum, 169, pp. 301-311. (doi: 10.1111/ppl.13073)

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Schröter, M., Alcocer, M. J.P., Cogdell, R. J., Kühn, O., Zigmantas, D. (2018) Origin of the two bands in the B800 ring and their involvement in the energy transfer network of Allochromatium vinosum Journal of Physical Chemistry Letters, 9, pp. 1340-1345. (doi: 10.1021/acs.jpclett.8b00438)

Sonani, R. R., Roszak, A. W., de Percin Northumberland, C. O., Madamwar, D., Cogdell, R. J. (2018) An improved crystal structure of C-phycoerythrin from the marine cyanobacterium Phormidium sp. A09DM Photosynthesis Research, 135, pp. 65-78. (doi: 10.1007/s11120-017-0443-2)

Southall, J., Henry, S. L., Gardiner, A. T., Roszak, A. W., Mullen, W., Carey, A.-M., Kelly, S. M., de Percin Northumberland, C. O., Cogdell, R. J. (2018) Characterisation of a pucBA deletion mutant from Rhodopseudomonas palustris lacking all but the pucBAd genes Photosynthesis Research, 135, pp. 9-21. (doi: 10.1007/s11120-017-0386-7)

Kowalska, D., Szalkowski, M., Ashraf, K., Grzelak, J., Lokstein, H., Niedziolka-Jonsson, J., Cogdell, R., Mackowski, S. (2018) Spectrally selective fluorescence imaging of Chlorobaculum tepidum reaction centers conjugated to chelator-modified silver nanowires Photosynthesis Research, 135, pp. 329-336. (doi: 10.1007/s11120-017-0455-y)

Kaiserli, E. (2018) Ultraviolet rays light up transcriptional networks regulating plant growth Developmental Cell, 44, pp. 409-411. (doi: 10.1016/j.devcel.2018.02.005)

Kawamoto, K., Tamiya, Y., Storr, T., Cogdell, R. J., Kinoshita, I., Hashimoto, H. (2018) Disentangling the ¹MLCT transition of [Ru(bpy)₃]²⁺ by Stark absorption spectroscopy Journal of Photochemistry and Photobiology A: Chemistry, 353, pp. 618-624. (doi: 10.1016/j.jphotochem.2017.08.025)

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Malý, P., Gardiner, A. T., Cogdell, R. J., van Grondelle, R., Mančal, T. (2018) Robust light harvesting by a noisy antenna Physical Chemistry Chemical Physics, 20, pp. 4360-4372. (doi: 10.1039/c7cp06139k)

Christie, J. M., Suetsugu, N., Sullivan, S., Wada, M. (2018) Shining light on the function of NPH3/RPT2-like proteins in phototropin signalling Plant Physiology, 176, pp. 1015-1024. (doi: 10.1104/pp.17.00835)

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Löhner, A., Cogdell, R., Köhler, J. (2018) Contribution of low-temperature single-molecule techniques to structural issues of pigment-protein complexes from photosynthetic purple bacteria Journal of the Royal Society: Interface, 15, (doi: 10.1098/rsif.2017.0680)

Soriano, G., Cloix, C., Heilmann, M., Núñez-Olivera, E., Martínez-Abaigar, J., Jenkins, G. I. (2018) Evolutionary conservation of structure and function of the UVR8 photoreceptor from the liverwort Marchantia polymorpha and the moss Physcomitrella patens New Phytologist, 217, pp. 151-162. (doi: 10.1111/nph.14767)

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Kell, A., Jassas, M., Hacking, K., Cogdell, R. J., Jankowiak, R. (2017) On light-induced photoconversion of B800 bacteriochlorophylls in the LH2 antenna of the purple sulfur bacterium Allochromatium vinosum Journal of Physical Chemistry B, 121, pp. 9999-10006. (doi: 10.1021/acs.jpcb.7b06185)

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Magennis, S., Toulmin, A., Baltierra-Jasso, L. E., Morten, M. J., Sabir, T., McGlynn, P., Schröder, G. F., Smith, B. O., Magennis, S. W. (2017) Conformational heterogeneity in a fully-complementary DNA three-way junction with a GC-rich branchpoint Biochemistry, 56, pp. 4985-4991. (doi: 10.1021/acs.biochem.7b00677)

Kuznetsova, V., Southall, J., Cogdell, R. J., Fuciman, M., Polívka, T. (2017) Spectroscopic properties of the S1 state of linear carotenoids after excess energy excitation Chemical Physics Letters, 683, pp. 448-453. (doi: 10.1016/j.cplett.2017.03.009)

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McIntosh, A., Meikle, L. M., Ormsby, M. J., McCormick, B. A., Christie, J. M., Brewer, J. M., Roberts, M., Wall, D. M. (2017) SipA activation of caspase-3 is a decisive mediator of host cell survival at early stages of Salmonella enterica serovar typhimurium Infection Infection and Immunity, 85, (doi: 10.1128/IAI.00393-17)

Olorunniji, F. J., McPherson, A. L., Rosser, S. J., Smith, M. C.M., Colloms, S. D., Stark, W. M. (2017) Control of serine integrase recombination directionality by fusion with the directionality factor Nucleic Acids Research, 45, pp. 8635-8645. (doi: 10.1093/nar/gkx567)

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Duan, H.-G., Prokhorenko, V. I., Cogdell, R. J., Ashraf, K., Stevens, A. L., Thorwart, M., Miller, R.J. D. (2017) Nature does not rely on long-lived electronic quantum coherence for photosynthetic energy transfer Proceedings of the National Academy of Sciences of the United States of America, 114, pp. 8493-8498. (doi: 10.1073/pnas.1702261114)

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Armfield, K., Wilson, J.B. (2017) Development of Therapeutic Approaches to Targeting EBV Related Disease

Alqarni, S., Wilson, J.B. (2017) Epstein-Barr Virus Nuclear Antigen-1, Action and Reaction as an Oncogene

Cai, S., Papanatsiou, M., Blatt, M. R., Chen, Z.-H. (2017) Speedy grass stomata: emerging molecular and evolutionary features Molecular Plant, 10, pp. 912-914. (doi: 10.1016/j.molp.2017.06.002)

Kell, A., Jassas, M., Acharya, K., Hacking, K., Cogdell, R. J., Jankowiak, R. (2017) Conformational complexity in the LH2 antenna of the purple sulfur bacterium Allochromatium vinosum revealed by hole-burning spectroscopy Journal of Physical Chemistry A, 121, pp. 4435-4446. (doi: 10.1021/acs.jpca.7b03188)

Riedelsberger, J., Blatt, M. R. (2017) Editorial: Roots—the hidden provider Frontiers in Plant Science, 8, (doi: 10.3389/fpls.2017.01021)

Yukihira, N., Sugai, Y., Fujiwara, M., Kosumi, D., Iha, M., Sakaguchi, K., Katsumura, S., Gardiner, A. T., Cogdell, R. J., Hashimoto, H. (2017) Strategies to enhance the excitation energy-transfer efficiency in a light-harvesting system using the intra-molecular charge transfer character of carotenoids Faraday Discussions, 198, pp. 59-71. (doi: 10.1039/c6fd00211k)

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Vialet-Chabrand, S., Hills, A., Wang, Y., Griffiths, H., Lew, V. L., Lawson, T., Blatt, M. R., Rogers, S. (2017) Global sensitivity analysis of OnGuard models identifies key hubs for transport interaction in stomatal dynamics Plant Physiology, 174, pp. 680-688. (doi: 10.1104/pp.17.00170)

Morris, E. P., da Fonseca, P. C.A. (2017) High-resolution cryo-EM proteasome structures in drug development Acta Crystallographica. Section D: Structural Biology, 73, pp. 522-533. (doi: 10.1107/S2059798317007021)

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Jezek, M., Blatt, M. R. (2017) The membrane transport system of the guard cell and its integration for stomatal dynamics Plant Physiology, 174, pp. 487-519. (doi: 10.1104/pp.16.01949)

Morreale, F. E., Bortoluzzi, A., Chaugule, V. K., Arkinson, C., Walden, H., Ciulli, A. (2017) Allosteric targeting of the Fanconi anemia ubiquitin-conjugating enzyme Ube2T by fragment screening Journal of Medicinal Chemistry, 60, pp. 4093-4098. (doi: 10.1021/acs.jmedchem.7b00147)

Kumar, A., Chaugule, V. K., Condos, T. E.C., Barber, K. R., Johnson, C., Toth, R., Sundaramoorthy, R., Knebel, A., Shaw, G. S., Walden, H. (2017) Parkin–phosphoubiquitin complex reveals cryptic ubiquitin-binding site required for RBR ligase activity Nature Structural and Molecular Biology, 24, pp. 475-483. (doi: 10.1038/nsmb.3400)

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Alqarni, S., Wilson, J.B. (2017) Epstein-Barr Virus Nuclear Antigen-1, in a Preclinical Model for BL

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Papanatsiou, M., Amtmann, A., Blatt, M. R. (2017) Stomatal clustering in Begonia associates with the kinetics of leaf gaseous exchange and influences water use efficiency Journal of Experimental Botany, 68, pp. 2309-2315. (doi: 10.1093/jxb/erx072)

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Mercer, I.P., Witting, T., Driver, T., Cogdell, R.J., Marangos, J.P., Tisch, J.W.G. (2017) Angle-resolved coherent wave mixing using a 4 fs ultra-broad bandwidth laser Optics Letters, 42, pp. 859-862. (doi: 10.1364/OL.42.000859)

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Olorunniji, F. J., Merrick, C., Rosser, S. J., Smith, M. C.M., Stark, W. M., Colloms, S. D. (2017) Multipart DNA assembly using site-specific recombinases from the large serine integrase family Springer New York

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Carey, A.-M., Zhang, H., Mieritz, D., Volosin, A., Gardiner, A., Cogdell, R., Yan, H., Seo, D.-K., Lin, S., Woodbury, N. W. (2016) Photocurrent generation by photosynthetic purple bacterial reaction centers interfaced with a porous antimony-doped tin oxide (ATO) electrode ACS Applied Materials and Interfaces, 8, pp. 25104-25110. (doi: 10.1021/acsami.6b07940)

Heilmann, M., Velanis, C. N., Cloix, C., Smith, B. O., Christie, J. M., Jenkins, G. I. (2016) Dimer/monomer status and in vivo function of salt-bridge mutants of the plant UV-B photoreceptor UVR8 Plant Journal, 88, pp. 71-81. (doi: 10.1111/tpj.13260)

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Morris, R. J., Brandani, G. B., Desai, V., Smith, B. O., Schor, M., MacPhee, C. E. (2016) The conformation of interfacially adsorbed Ranaspumin-2 Is an arrested state on the unfolding pathway Biophysical Journal, 111, pp. 732-742. (doi: 10.1016/j.bpj.2016.06.006)

Löhner, A., Ashraf, K., Cogdell, R. J., Köhler, J. (2016) Fluorescence-excitation and emission spectroscopy on single FMO complexes Scientific Reports, 6, (doi: 10.1038/srep31875)

Armfield, K., Liskamp, R., Wilson, J.B. (2016) Therapeutic Approaches to Targetting Epstein-Barr Virus Related Disease

Maćkowski, S., Czechowski, N., Ashraf, K. U., Szalkowski, M., Lokstein, H., Cogdell, R. J., Kowalska, D. (2016) Origin of bimodal fluorescence enhancement factors of Chlorobaculum tepidumreaction centers on silver island films FEBS Letters, 590, pp. 2558-2565. (doi: 10.1002/1873-3468.12292)

Kalef-Ezra, E., Kotzamani, D., Zaganas, I., Katrakili, N., Plaitakis, A., Tokatlidis, K. (2016) Import of a major mitochondrial enzyme depends on synergy between two distinct helices of its presequence Biochemical Journal, 473, pp. 2813-2829. (doi: 10.1042/BCJ20160535)

Findlay, K. M.W., Jenkins, G. I. (2016) Regulation of UVR8 photoreceptor dimer/monomer photo-equilibrium in Arabidopsis plants grown under photoperiodic conditions Plant Cell and Environment, 39, pp. 1706-1714. (doi: 10.1111/pce.12724)

Vance, S. J., Desai, V., Smith, B. O., Kennedy, M. W., Cooper, A. (2016) Aqueous solubilization of C60 fullerene by natural protein surfactants, latherin and ranaspumin-2 Biophysical Chemistry, 214-15, pp. 27-32. (doi: 10.1016/j.bpc.2016.05.003)

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Gawthorne, J. A., Audry, L., McQuitty, C., Dean, P., Christie, J. M., Enninga, J., Roe, A. J. (2016) Visualizing translocation and localization of bacterial type III effector proteins using a genetically encoded reporter system Applied and Environmental Microbiology, 82, pp. 2700-2708. (doi: 10.1128/AEM.03418-15)

Buckley, A. M., Jukes, C., Candlish, D., Irvine, J. J., Spencer, J., Fagan, R. P., Roe, A. J., Christie, J., Fairweather, N. F., Douce, G. R. (2016) Lighting up Clostridium Difficile: reporting gene expression using fluorescent Lov domains Scientific Reports, 6, (doi: 10.1038/srep23463)

Malý, P., Gruber, J. M., Cogdell, R. J., Mančal, T., van Grondelle, R. (2016) Ultrafast energy relaxation in single light-harvesting complexes Proceedings of the National Academy of Sciences of the United States of America, 113, pp. 2934-2939. (doi: 10.1073/pnas.1522265113)

Sullivan, S., Hart, J. E., Rasch, P., Walker, C., Christie, J. (2016) Phytochrome A mediates blue-light enhancement of second-positive phototropism in Arabidopsis Frontiers in Plant Science, 7, (doi: 10.3389/fpls.2016.00290)

Jones, D. D., Beal, J., Haddock-Angelli, T., Gershater, M., de Mora, K., Lizarazo, M., Hollenhorst, J., Rettberg, R., iGEM Interlab Study Contributors, (2016) Reproducibility of fluorescent expression from engineered biological constructs in E. coli PLoS ONE, 11, (doi: 10.1371/journal.pone.0150182)

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Ferretti, M., Hendrikx, R., Romero, E., Southall, J., Cogdell, R. J., Novoderezhkin, V. I., Scholes, G. D., van Grondelle, R. (2016) Dark states in the light-harvesting complex 2 revealed by two-dimensional electronic spectroscopy Scientific Reports, 6, (doi: 10.1038/srep20834)

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Magdaong, N. M., LaFountain, A. M., Hacking, K., Niedzwiedzki, D. M., Gibson, G. N., Cogdell, R., Frank, H. A. (2016) Spectral heterogeneity and carotenoid-to-bacteriochlorophyll energy transfer in LH2 light-harvesting complexes from Allochromatium vinosum Photosynthesis Research, 127, pp. 171-187. (doi: 10.1007/s11120-015-0165-2)

Henry, S. L., Withers, J. M., Singh, I., Cooper, J. M., Clark, A. W., Burley, G. A., Cogdell, R. J. (2016) DNA-directed spatial assembly of photosynthetic light-harvesting proteins Organic and Biomolecular Chemistry, 14, pp. 1359-1362. (doi: 10.1039/c5ob02351c)

Pokhilko, A., Zhao, J., Stark, W. M., Colloms, S. D., Ebenhöh, O. (2016) A simplified mathematical model of directional DNA site-specific recombination by serine integrases Journal of the Royal Society: Interface, 14, (doi: 10.1098/rsif.2016.0618)

Connolly, J. P. R., Gabrielsen, M., Goldstone, R. J., Grinter, R., Wang, D., Cogdell, R. J., Walker, D., Smith, D. G. E., Roe, A. J. (2016) A highly conserved bacterial d-serine uptake system links host metabolism and virulence PLoS Pathogens, 12, (doi: 10.1371/journal.ppat.1005359)

Minguet-Parramona, C., Wang, Y., Hills, A., Vialet-Chabrand, S., Griffiths, H., Rogers, S., Lawson, T., Lew, V. L., Blatt, M. R. (2016) An optimal frequency in Ca2+ oscillations for stomatal closure is an emergent property of ion transport in guard cells Plant Physiology, 170, pp. 33-42. (doi: 10.1104/pp.15.01607)

Sullivan, S., Petersen, J., Blackwood, L., Papanatsiou, M., Christie, J. M. (2016) Functional characterisation of Ostreococcus tauri phototropin New Phytologist, 209, pp. 612-623. (doi: 10.1111/nph.13640)

Hashimoto, H., Uragami, C., Cogdell, R. J. (2016) Carotenoids and Photosynthesis Springer International Publishing

Kosumi, D., Horibe, T., Sugisaki, M., Cogdell, R. J., Hashimoto, H. (2016) Photoprotection mechanism of light-harvesting antenna complex from purple bacteria Journal of Physical Chemistry B, 120, pp. 951-956. (doi: 10.1021/acs.jpcb.6b00121)

Wientjes, E., Renger, J., Cogdell, R., van Hulst, N. F. (2016) Pushing the photon limit: nanoantennas increase maximal photon stream and total photon number Journal of Physical Chemistry Letters, 7, pp. 1604-1609. (doi: 10.1021/acs.jpclett.6b00491)

Merrick, C.A., Wardrope, C., Paget, J.E., Colloms, S.D., Rosser, S.J. (2016) Rapid optimization of engineered metabolic pathways with serine integrase recombinational assembly (SIRA) Elsevier

Velanis, C. N., Herzyk, P., Jenkins, G. I. (2016) Regulation of transcription by the Arabidopsis UVR8 photoreceptor involves a specific histone modification Plant Molecular Biology, 92, pp. 425-443. (doi: 10.1007/s11103-016-0522-3)

Miki, T., Buckup, T., Krause, M. S., Southall, J., Cogdell, R. J., Motzkus, M. (2016) Vibronic coupling in the excited-states of carotenoids Physical Chemistry Chemical Physics, 18, pp. 11443-11453. (doi: 10.1039/C5CP07542D)

Kita, S., Fujii, R., Cogdell, R. J., Hashimoto, H. (2015) Characterization of fucoxanthin aggregates in mesopores of silica gel: electronic absorption and circular dichroism spectroscopies Journal of Photochemistry and Photobiology A: Chemistry, 313, pp. 3-8. (doi: 10.1016/j.jphotochem.2015.05.009)

Hashimoto, H., Sugai, Y., Uragami, C., Gardiner, A. T., Cogdell, R. (2015) Natural and artificial light-harvesting systems utilizing the functions of carotenoids Journal of Photochemistry and Photobiology C: Photochemistry Reviews, 25, pp. 46-70. (doi: 10.1016/j.jphotochemrev.2015.07.004)

Uragami, C., Sugai, Y., Hanjo, K., Sumino, A., Fujii, R., Nishioka, T., Kinoshita, I., Dewa, T., Nango, M., Gardiner, A. T., Cogdell, R. J., Hashimoto, H. (2015) Observation of hybrid artificial photosynthetic membranes using peripheral and core antennae from two different species of photosynthetic bacteria by AFM and fluorescence micro-spectroscopy Journal of Photochemistry and Photobiology A: Chemistry, 313, pp. 60-71. (doi: 10.1016/j.jphotochem.2015.06.009)

Kaiserli, E., Páldi, K., O’Donnell, L., Batalov, O., Pedmale, U. V., Nusinow, D. A., Kay, S. A., Chory, J. (2015) Integration of light and photoperiodic signaling in transcriptional nuclear foci Developmental Cell, 35, pp. 311-321. (doi: 10.1016/j.devcel.2015.10.008)

Schörner, M., Beyer, S. R., Southall, J., Cogdell, R. J., Köhler, J. (2015) Conformational memory of a protein revealed by single-molecule spectroscopy Journal of Physical Chemistry B, 119, pp. 13964-13970. (doi: 10.1021/acs.jpcb.5b07494)

Schörner, M., Beyer, S. R., Southall, J., Cogdell, R., Köhler, J. (2015) Multi-level, multi time-scale fluorescence intermittency of photosynthetic LH2 complexes: a precursor of non-photochemical quenching? Journal of Physical Chemistry B, 119, pp. 13958-13963. (doi: 10.1021/acs.jpcb.5b06979)

Rey, B. M.F., Ibáñez, S. M., Gabrielsen, M., Franchini, G. R., Roe, A. J., Griffiths, K., Zhan, B., Cooper, A., Kennedy, M. W., Córsico, B., Smith, B. O. (2015) Diversity in the structures and ligand binding sites of nematode fatty acid and retinol binding proteins revealed by Na-FAR-1 from Necator americanus Biochemical Journal, 471, pp. 403-414. (doi: 10.1042/BJ20150068)

Thomson, R., Smith, B. O. (2015) Solution structure of human MBD1 CXXC1 Journal of Biomolecular NMR, 63, pp. 309-314. (doi: 10.1007/s10858-015-9986-8)

Kumar, A., Aguirre, J. D., Condos, T. E.C., Martinez-Torres, R. J., Chaugule, V. K., Toth, R., Sundaramoorthy, R., Mercier, P., Knebel, A., Spratt, D. E., Barber, K. R., Shaw, G. S., Walden, H. (2015) Disruption of the autoinhibited state primes the E3 ligase parkin for activation and catalysis EMBO Journal, 34, pp. 2506-2521. (doi: 10.15252/embj.201592337)

Cogdell, R. J., Gardiner, A. T. (2015) Activated OCP unlocks nonphotochemical quenching in cyanobacteria Proceedings of the National Academy of Sciences of the United States of America, 112, pp. 12547-12548. (doi: 10.1073/pnas.1517477112)

Alles, J., Hasler, D., Kazmi, S. M. A., Tesson, M., Hamilton, A., Schlegel, L., Marx, S., Eichner, N., Reinhardt, R., Meister, G., Wilson, J. B., Grässer, F. A. (2015) Epstein-Barr virus EBER transcripts affect miRNA-mediated regulation of specific targets and are processed to small RNA species Non-Coding RNA, 1, pp. 170-191. (doi: 10.3390/ncrna1030170)

Bowyer, J., Zhao, J., Rosser, S., Colloms, S., Bates, D. (2015) Development and experimental validation of a mechanistic model of in vitro DNA recombination (doi: 10.1109/EMBC.2015.7318519)

Joshi, A., Grinter, R., Josts, I., Chen, S., Wojdyla, J., Lowe, E., Kaminska, R., Sharp, C., McCaughey, L., Roszak, A., Cogdell, R., Byron, O., Walker, D., Kleanthous, C. (2015) Structures of the ultra-high-affinity protein–protein complexes of pyocins S2 and AP41 and their cognate immunity proteins from pseudomonas aeruginosa Journal of Molecular Biology, 427, pp. 2852-2866. (doi: 10.1016/j.jmb.2015.07.014)

Miles, J. A., Frost, M. G., Carroll, E., Rowe, M. L., Howard, M. J., Sidhu, A., Chaugule, V. K., Alpi, A. F., Walden, H. (2015) The Fanconi Anemia DNA repair pathway is regulated by an interaction between ubiquitin and the E2-like fold domain of FANCL Journal of Biological Chemistry, 290, pp. 20995-21006. (doi: 10.1074/jbc.M115.675835)

Kazlauskaite, A., Martinez-Torres, R. J., Wilkie, S., Kumar, A., Peltier, J., Gonzalez, A., Johnson, C., Zhang, J., Hope, A. G., Peggie, M., Trost, M., van Aalten, D. M.F., Alessi, D. R., Prescott, A. R., Knebel, A., Walden, H., Muqit, M. M.K. (2015) Binding to serine 65-phosphorylated ubiquitin primes Parkin for optimal PINK1-dependent phosphorylation and activation EMBO Reports, 16, pp. 939-954. (doi: 10.15252/embr.201540352)

Grefen, C., Karnik, R., Larson, E., Lefoulon, C., Wang, Y., Waghmare, S., Zhang, B., Hills, A., Blatt, M. R. (2015) A vesicle-trafficking protein commandeers Kv channel voltage sensors for voltage-dependent secretion Nature Plants, 1, (doi: 10.1038/nplants.2015.108)

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da Fonseca, P. C.A., Morris, E. P. (2015) Cryo-EM reveals the conformation of a substrate analogue in the human 20S proteasome core Nature Communications, 6, (doi: 10.1038/ncomms8573)

Fyfe, C.D., Grinter, R., Josts, I., Mosbahi, K., Roszak, A.W., Cogdell, R.J., Wall, D.M., Burchmore, R.J.S., Byron, O., Walker, D. (2015) Structure of protease-cleaved escherichia coliα-2-macroglobulin reveals a putative mechanism of conformational activation for protease entrapment Acta Crystallographica. Section D: Biological Crystallography, 71, pp. 1478-1486. (doi: 10.1107/s1399004715008548)

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Gao, X., Wilson, J.B. (2015) LMP1: Chronic Inflammation and Carcinogenesis

Zhang, B., Karnik, R., Wang, Y., Wallmeroth, N., Blatt, M. R., Grefen, C. (2015) The arabidopsis R-SNARE VAMP721 interacts with KAT1 and KC1 K+ channels to moderate K+ current at the plasma membrane Plant Cell, 27, pp. 1697-1717. (doi: 10.1105/tpc.15.00305)

Papanatsiou, M., Scuffi, D., Blatt, M. R., Garia-Mata, C. (2015) Hydrogen sulphide regulates inward-rectifying K+ channels in conjunction with stomatal closure Plant Physiology, 168, pp. 29-35. (doi: 10.1104/pp.114.256057)

Preuten, T., Blackwood, L., Christie, J. M., Fankhauser, C. (2015) Lipid anchoring of Arabidopsis phototropin 1 to assess the functional significance of receptor internalization: should I stay or should I go? New Phytologist, 206, pp. 1038-1050. (doi: 10.1111/nph.13299)

Fankhauser, C., Christie, J. M. (2015) Plant Phototropic Growth Current Biology, 25, pp. R384-R389. (doi: 10.1016/j.cub.2015.03.020)

Parnell, E., Smith, B. O., Yarwood, S. J. (2015) The cAMP sensors, EPAC1 and EPAC2, display distinct subcellular distributions despite sharing a common nuclear pore localisation signal Cellular Signalling, 27, pp. 989-996. (doi: 10.1016/j.cellsig.2015.02.009)

Buetow, L., Gabrielsen, M., Anthony, N. G., Dou, H., Patel, A., Aitkenhead, H., Sibbet, G. J., Smith, B. O., Huang, D. T. (2015) Activation of a primed RING E3-E2–ubiquitin complex by non-covalent ubiquitin Molecular Cell, 58, pp. 297-310. (doi: 10.1016/j.molcel.2015.02.017)

Connolly, J. P.R., Goldstone, R. J., Burgess, K., Cogdell, R. J., Beatson, S. A., Vollmer, W., Smith, D. G.E., Roe, A. (2015) The host metabolite D-serine contributes to bacterial niche specificity through gene selection ISME Journal, 9, pp. 1039-1051. (doi: 10.1038/ismej.2014.242)

Kaiserli, E., Chory, J. (2015) The role of phytochromes in triggering plant developmental transitions John Wiley and Sons Ltd

Karnik, R., Zhang, B., Waghmare, S., Aderhold, C., Grefen, C., Blatt, M. R. (2015) Binding of SEC11 indicates its role in SNARE recycling after vesicle fusion and identifies two pathways for vesicular traffic to the plasma membrane Plant Cell, 27, pp. 675-694. (doi: 10.1105/tpc.114.134429)

Shigemitsu, Y., Ikeya, T., Yamamoto, A., Tsuchie, Y., Mishima, M., Smith, B. O., Güntert, P., Ito, Y. (2015) Evaluation of the reliability of the maximum entropy method for reconstructing 3D and 4D NOESY-type NMR spectra of proteins Biochemical and Biophysical Research Communications, 457, pp. 200-205. (doi: 10.1016/j.bbrc.2014.12.088)

Heilmann, M., Christie, J. M., Kennis, J. T.M., Jenkins, G. I., Mathes, T. (2015) Photoinduced transformation of UVR8 monitored by vibrational and fluorescence spectroscopy Photochemical and Photobiological Sciences, 14, pp. 252-257. (doi: 10.1039/c4pp00246f)

Franchini, G. R., Pórfido, J. L., Ibáñez Shimabukuro, M., Rey Burusco, M. F., Bélgamo, J. A., Smith, B. O., Kennedy, M. W., Córsico, B. (2015) The unusual lipid binding proteins of parasitic helminths and their potential roles in parasitism and as therapeutic targets Prostaglandins, Leukotrienes and Essential Fatty Acids (PLEFA), 93, pp. 31-36. (doi: 10.1016/j.plefa.2014.08.003)

Cannone, G., Xu, Y., Beattie, T. R., Bell, S. D., Spagnolo, L. (2015) The architecture of an Okazaki fragment-processing holoenzyme from the archaeon Sulfolobus solfataricus Biochemical Journal, 465, pp. 239-245. (doi: 10.1042/BJ20141120)

Löhner, A., Carey, A.-M., Hacking, K., Picken, N., Kelly, S., Cogdell, R., Köhler, J. (2015) The origin of the split B800 absorption peak in the LH2 complexes from Allochromatium vinosum Photosynthesis Research, 123, pp. 23-31. (doi: 10.1007/s11120-014-0036-2)

Cosentino, C., Alberio, L., Gazzarrini, S., Aquila, M., Romano, E., Cermenati, S., Zuccolini, P., Petersen, J., Beltrame, M., Van Etten, J. L., Christie, J., Thiel, G., Moroni, A. (2015) Engineering of a light-gated potassium channel Science, 348, pp. 707-710. (doi: 10.1126/science.aaa2787)

Christie, J. M., Blackwood, L., Petersen, J., Sullivan, S. (2015) Plant flavoprotein photoreceptors Plant and Cell Physiology, 56, pp. 401-413. (doi: 10.1093/pcp/pcu196)

Mathes, T., Heilmann, M., Pandit, A., Zhu, J., Ravensbergen, J., Kloz, M., Fu, Y., Smith, B.O., Christie, J.M., Jenkins, G.I., Kennis, J.T.M. (2015) Proton-coupled electron transfer constitutes the photoactivation mechanism of the plant photoreceptor UVR8 Journal of the American Chemical Society, 137, pp. 8113-8120. (doi: 10.1021/jacs.5b01177)

Ulm, R., Jenkins, G. (2015) Q&A: How do plants sense and respond to UV-B radiation? BMC Biology, 13, (doi: 10.1186/s12915-015-0156-y)

Miyamori, T., Nakasone, Y., Hitomi, K., Christie, J. M., Getzoff, E. D., Terazima, M. (2015) Reaction dynamics of the UV-B photosensor UVR8 Photochemical and Photobiological Sciences, 14, pp. 995-1004. (doi: 10.1039/c5pp00012b)

Mordas, A., Tokatlidis, K. (2015) The MIA pathway: a key regulator of mitochondrial oxidative protein folding and biogenesis Accounts of Chemical Research, 48, pp. 2191-2199. (doi: 10.1021/acs.accounts.5b00150)

Ji, H., Wang, Y., Cloix, C., Li, K., Jenkins, G. I., Wang, S., Shang, Z., Shi, Y., Yang, S., Li, X. (2015) The arabidopsis RCC1 family protein TCF1 regulates freezing tolerance and cold acclimation through modulating lignin biosynthesis PLoS Genetics, 11, (doi: 10.1371/journal.pgen.1005471)

Beyer, S. R., Müller, L., Southall, J., Cogdell, R. J., Ullmann, G. M., Köhler, J. (2015) The open, the closed, and the empty: time-resolved fluorescence spectroscopy and computational analysis of RC-LH1 complexes from Rhodopseudomonas palustris Journal of Physical Chemistry B, 119, pp. 1362-1373. (doi: 10.1021/jp510822k)

Dominguez, P.N., Himmelstoss, M., Michelmann, J., Lehner, F., Gardiner, A., Cogdell, R.J., Zinth, W. (2015) The primary photosynthetic energy conversion in bacterial reaction centers—stepwise electron transfer and the effect of elevated exposure levels Springer

Singh, V.P., Westberg, M., Wang, C., Dahlberg, P.D., Gellen, T., Gardiner, A.T., Cogdell, R.J., Engel, G.S. (2015) Towards quantification of vibronic coupling in photosynthetic antenna complexes Journal of Chemical Physics, 142, pp. 212446. (doi: 10.1063/1.4921324)

Maiuri, M., Lüer, L., Henry, S., Carey, A.-M., Cogdell, R.J., Cerullo, G., Polli, D. (2015) Ultrafast energy flow and equilibration dynamics in photosynthetic light-harvesting complexes Springer International Publishing

Perlík, V., Seibt, J., Cranston, L. J., Cogdell, R. J., Lincoln, C. N., Savolainen, J., Šanda, F., Mančal, T., Hauer, J. (2015) Vibronic coupling explains the ultrafast carotenoid-to-bacteriochlorophyll energy transfer in natural and artificial light harvesters Journal of Chemical Physics, 142, (doi: 10.1063/1.4919548)

Wientjes, E., Renger, J., Curto, A. G., Cogdell, R., van Hulst, N. F. (2014) Nanoantenna enhanced emission of light-harvesting complex 2: the role of resonance, polarization, and radiative and non-radiative rates Physical Chemistry Chemical Physics, 16, pp. 24739-24746. (doi: 10.1039/c4cp03636k)

Hussain, M., Gatherer, D., Wilson, J. B. (2014) Modelling the structure of full-length Epstein-Barr virus nuclear antigen 1 Virus Genes, 49, pp. 358-372. (doi: 10.1007/s11262-014-1101-9)

Jenkins, G. I. (2014) Structure and function of the UV-B photoreceptor UVR8 Current Opinion in Structural Biology, 29, pp. 52-57. (doi: 10.1016/j.sbi.2014.09.004)

Carey, A.-M., Hacking, K., Picken, N., Honkanen, S., Kelly, S., Niedzwiedzki, D. M., Blankenship, R. E., Shimizu, Y., Wang-Otomo, Z.-Y., Cogdell, R. J. (2014) Characterisation of the LH2 spectral variants produced by the photosynthetic purple sulphur bacterium Allochromatium vinosum Biochimica et Biophysica Acta: Bioenergetics, 1837, pp. 1849-1860. (doi: 10.1016/j.bbabio.2014.07.022)

Lefoulon, C., Karnik, R., Honsbein, A., Gutla, P. V., Grefen, C., Riedelsberger, J., Poblete, T., Dreyer, I., Gonzalez, W., Blatt, M. R. (2014) Voltage-sensor transitions of the inward-rectifying K+ channel KAT1 indicate a latching mechanism biased by hydration within the voltage sensor Plant Physiology, 166, pp. 960-975. (doi: 10.1104/pp.114.244319)

Hayes, S., Velanis, C. N., Jenkins, G. I., Franklin, K. A. (2014) UV-B detected by the UVR8 photoreceptor antagonizes auxin signaling and plant shade avoidance Proceedings of the National Academy of Sciences of the United States of America, 111, pp. 11894-11899. (doi: 10.1073/pnas.1403052111)

Hachez, C., Laloux, T., Reinhardt, H., Cavez, D., Degand, H., Grefen, C., De Rycke, R., Inze, D., Blatt, M. R., Russinova, E., Chaumont, F. (2014) Arabidopsis SNAREs SYP61 and SYP121 coordinate the trafficking of plasma membrane aquaporin PIP2;7 to modulate the cell membrane water permeability Plant Cell, 26, pp. 3132-3147. (doi: 10.1105/tpc.114.127159)

Fogg, P. C.M., Colloms, S., Rosser, S., Stark, M., Smith, M. C.M. (2014) New applications for phage integrases Journal of Molecular Biology, 426, pp. 2703-2716. (doi: 10.1016/j.jmb.2014.05.014)

Taniguchi, M., Henry, S., Cogdell, R. J., Lindsey, J. S. (2014) Statistical considerations on the formation of circular photosynthetic light-harvesting complexes from Rhodopseudomonas palustris Photosynthesis Research, 121, pp. 49-60. (doi: 10.1007/s11120-014-9975-x)

Grinter, R., Josts, I., Zeth, K., Roszak, A. W., McCaughey, L. C., Cogdell, R. J., Milner, J. J., Kelly, S. M., Byron, O., Walker, D. (2014) Structure of the atypical bacteriocin pectocin M2 implies a novel mechanism of protein uptake Molecular Microbiology, 93, pp. 234-246. (doi: 10.1111/mmi.12655)

Beckham, K. S.H., Connolly, J. P.R., Ritchie, J. M., Wang, D., Gawthorne, J. A., Tahoun, A., Gally, D. L., Burgess, K., Burchmore, R. J., Smith, B. O., Beatson, S. A., Byron, O., Wolfe, A. J., Douce, G., Roe, A. J. (2014) The metabolic enzyme AdhE controls the virulence of Escherichia coli O157:H7 Molecular Microbiology, 93, pp. 199-211. (doi: 10.1111/mmi.12651)

Cameron, R. T., Quinn, S. D., Cairns, L. S., MacLeod, R., Samuel, I. D.W., Smith, B. O., Penedo, J. C., Baillie, G. S. (2014) The phosphorylation of Hsp20 enhances its association with amyloid-β to increase protection against neuronal cell death Molecular and Cellular Neuroscience, 61, pp. 46-55. (doi: 10.1016/j.mcn.2014.05.002)

Wientjes, E., Renger, J., Curto, A. G., Cogdell, R., van Hulst, N. F. (2014) Strong antenna-enhanced fluorescence of a single light-harvesting complex shows photon antibunching Nature Communications, 5, (doi: 10.1038/ncomms5236)

Blatt, M. R., Wang, Y., Leonhardt, N., Hills, A. (2014) Exploring emergent properties in cellular homeostasis using OnGuard to model K+ and other ion transport in guard cells Journal of Plant Physiology, 171, pp. 770-778. (doi: 10.1016/j.jplph.2013.09.014)

Dominguez, P. N., Himmelstoss, M., Michelmann, J., Lehner, F. T., Gardiner, A. T., Cogdell, R. J., Zinth, W. (2014) Primary reactions in photosynthetic reaction centers of Rhodobacter sphaeroides – time constants of the initial electron transfer Chemical Physics Letters, 601, pp. 103-109. (doi: 10.1016/j.cplett.2014.03.085)

Kunz, R., Timpmann, K., Southall, J., Cogdell, R. J., Freiberg, A., Köhler, J. (2014) Single-molecule spectroscopy unmasks the lowest exciton state of the B850 assembly in LH2 from Rps. acidophila Biophysical Journal, 106, pp. 2008-2016. (doi: 10.1016/j.bpj.2014.03.023)

Walden, H., Deans, A. J. (2014) The Fanconi anemia DNA repair pathway: structural and functional insights into a complex disorder Annual Review of Biophysics, 43, pp. 257-278. (doi: 10.1146/annurev-biophys-051013-022737)

Eisenach, C., Papanatsiou, M., Hillert, E.-K., Blatt, M. R. (2014) Clustering of the K⁺ channel GORK of Arabidopsis parallels its gating by extracellular K⁺ Plant Journal, 78, pp. 203-214. (doi: 10.1111/tpj.12471)

Ibáñez-Shimabukuro, M., Rey-Burusco, M.F., Cooper, A., Kennedy, M. W., Córsico, B., Smith, B. O. (2014) Resonance assignment of As-p18, a fatty acid binding protein secreted by developing larvae of the parasitic nematode Ascaris suum Biomolecular NMR Assignments, 8, pp. 33-36. (doi: 10.1007/s12104-012-9447-1)

Blatt, M. R., Chaumont, F., Farquhar, G. (2014) Focus on water Plant Physiology, 164, pp. 1553-1555. (doi: 10.1104/pp.114.900484)

Vance, S. J., McDonald, R. E., Cooper, A., Kennedy, M. W., Smith, B. O. (2014) Resonance assignments for latherin, a natural surfactant protein from horse sweat Biomolecular NMR Assignments, 8, pp. 213-216. (doi: 10.1007/s12104-013-9485-3)

Lawson, T., Blatt, M. R. (2014) Stomatal size, speed, and responsiveness impact on photosynthesis and water use efficiency Plant Physiology, 164, pp. 1556-1570. (doi: 10.1104/pp.114.237107)

Wang, Y., Hills, A., Blatt, M. (2014) Systems analysis of guard cell membrane transport for enhanced stomatal dynamics and water use efficiency Plant Physiology, 164, pp. 1593-1599. (doi: 10.1104/pp.113.233403)

Tossi, V., Lamattina, L., Jenkins, G. I., Cassia, R. O. (2014) Ultraviolet-B-induced Sstomatal closure in arabidopsis is regulated by the UV RESISTANCE LOCUS8 photoreceptor in a nitric oxide-dependent mechanism Plant Physiology, 164, pp. 2220-2230. (doi: 10.1104/pp.113.231753)

Yvon, C., Surman, A. J., Hutin, M., Alex, J., Smith, B. O., Long, D. L., Cronin, L. (2014) Polyoxometalate clusters integrated into peptide chains and as inorganic amino acids: solution- and solid-phase approaches Angewandte Chemie (International Edition), 53, pp. 3336-3341. (doi: 10.1002/anie.201311135)

Rey-Burusco, M.F., Ibañez-Shimabukuro, M., Cooper, A., Kennedy, M. W., Córsico, B., Smith, B. O. (2014) 1H, 13C and 15N chemical shift assignments of Na-FAR-1, a helix-rich fatty acid and retinol binding protein of the parasitic nematode Necator americanus Biomolecular NMR Assignments, 8, pp. 19-21. (doi: 10.1007/s12104-012-9444-4)

Gehl, B., Lee, C. P., Bota, P., Blatt, M. R., Sweetlove, L. J. (2014) An arabidopsis stomatin-like protein affects mitochondrial respiratory supercomplex organization Plant Physiology, 164, pp. 1389-1400. (doi: 10.1104/pp.113.230383)

Kallergi, E., Kalef-Ezra, E., Karagouni-Dalakoura, K., Tokatlidis, K. (2014) Common players in mitochondria biogenesis and neuronal protection against stress-induced apoptosis Neurochemical Research, 39, pp. 546-555. (doi: 10.1007/s11064-013-1109-x)

Spratt, D. E., Walden, H., Shaw, G. S. (2014) RBR E3 ubiquitin ligases: new structures, new insights, new questions Biochemical Journal, 458, pp. 421-437. (doi: 10.1042/BJ20140006)

Hodson, C., Purkiss, A., Miles, J. A., Walden, H. (2014) Structure of the human FANCL RING-Ube2T complex reveals determinants of cognate E3-E2 selection Structure, 22, pp. 337-344. (doi: 10.1016/j.str.2013.12.004)

Colloms, S.D., Merrick, C.A., Olorunniji, F.J., Stark, W.M., Smith, M.C.M., Osbourn, A., Keasling, J.D., Rosser, S.J. (2014) Rapid metabolic pathway assembly and modification using serine integrase site-specific recombination Nucleic Acids Research, 42, pp. e23. (doi: 10.1093/nar/gkt1101)

McCaughey, L. C., Grinter, R., Josts, I., Roszak, A. W., Waløen, K., Cogdell, R. J., Milner, J., Evans, T., Kelly, S., Tucker, N. P., Byron, O., Smith, B., Walker, D. (2014) Lectin-like bacteriocins from Pseudomonas spp. utilise D-rhamnose containing lipopolysaccharide as a cellular receptor PLoS Pathogens, 10, pp. e1003898. (doi: 10.1371/journal.ppat.1003898)

Caldwell, S.T., Maclean, C., Riehle, M., Cooper, A., Nutley, M., Rabani, G., Fitzpatrick, B., Rotello, V.M., Smith, B.O., Khaled, B., Woisel, P., Cooke, G. (2014) Protein-mediated dethreading of a biotin-functionalised pseudorotaxane Organic and Biomolecular Chemistry, 12, pp. 511-516. (doi: 10.1039/C3OB41612G)

Jenkins, G. I. (2014) The UV-B photoreceptor UVR8: from structure to physiology Plant Cell, 26, pp. 21-37. (doi: 10.1105/tpc.113.119446)

Christie, J., Blatt, M. (2014) Plant physiology sees the light Plant Physiology, 164, pp. 12. (doi: 10.1104/pp.113.900477)

Blatt, M. R., Grefen, C. (2014) Applications of fluorescent marker proteins in plant cell biology Humana Press

Cranston, L. J., Roszak, A. W., Cogdell, R. J. (2014) Crystallization and preliminary X-ray diffraction analysis of the peripheral light-harvesting complex LH2 from Marichromatium purpuratum Acta Crystallographica. Section F: Structural Biology Communications, 70, pp. 808-813. (doi: 10.1107/S2053230X14009303)

Twardowska, M., Kamińska, I., Wiwatowski, K., Ashraf, K. U., Cogdell, R. J., Mackowski, S., Niedziółka-Jönsson, J. (2014) Fluorescence enhancement of photosynthetic complexes separated from nanoparticles by a reduced graphene oxide layer Applied Physics Letters, 104, (doi: 10.1063/1.4867167)

Magdaong, N. M., LaFountain, A. M., Greco, J. A., Gardiner, A. T., Carey, A.-M., Cogdell, R. J., Gibson, G. N., Birge, R. R., Frank, H. A. (2014) High efficiency light harvesting by carotenoids in the lh2 complex from photosynthetic bacteria: unique adaptation to growth under low-light conditions Journal of Physical Chemistry B, 118, pp. 11172-11189. (doi: 10.1021/jp5070984)

Czechowski, N., Lokstein, H., Kowalska, D., Ashraf, K., Cogdell, R. J., Mackowski, S. (2014) Large plasmonic fluorescence enhancement of cyanobacterial photosystem I coupled to silver island films Applied Physics Letters, 105, pp. 043701. (doi: 10.1063/1.4891856)

Bujak, Ł., Olejnik, M., Brotosudarmo, T. H. P., Schmidt, M. K., Czechowski, N., Piatkowski, D., Aizpurua, J., Cogdell, R. J., Heiss, W., Mackowski, S. (2014) Polarization control of metal-enhanced fluorescence in hybrid assemblies of photosynthetic complexes and gold nanorods Physical Chemistry Chemical Physics, 16, pp. 9015-9022. (doi: 10.1039/c3cp54364a)

Josts, I., Grinter, R., Kelly, S. M., Mosbahi, K., Roszak, A., Cogdell, R., Smith, B. O., Byron, O., Walker, D. (2014) Recombinant expression, purification, crystallization and preliminary X-ray diffraction analysis of the C-terminal DUF490963–1138 domain of TamB from Escherichia coli Acta Crystallographica. Section F: Structural Biology Communications, 70, pp. 1272-1275. (doi: 10.1107/S2053230X14017403)

Cogdell, R. J., Roszak, A. W. (2014) Structural biology: the purple heart of photosynthesis Nature, 508, pp. 196-197. (doi: 10.1038/nature13219)

Gabrielsen, M., Abdul-Rahman, P. S., Othman, S., Hashim, O. H., Cogdell, R. J. (2014) Structures and binding specificity of galactose- and mannose-binding lectins from champedak: differences from jackfruit lectins Acta Crystallographica. Section F: Structural Biology Communications, 70, pp. 709-716. (doi: 10.1107/S2053230X14008966)

Karnik, R., Ludlow, M. J., Abuarab, N., Smith, A. J., Hardy, M. E.L., Elliott, D. J.S., Sivaprasadarao, A. (2013) Endocytosis of hERG is clathrin-independent and involves Arf6 PLoS ONE, 8, (doi: 10.1371/journal.pone.0085630)

Laird, J., McInally, C., Carr, C., Doddiah, S., Yates, G., Chrysanthou, E., Khattab, A., Love, A.J., Geri, C., Sadanandom, A., Smith, B.O., Kobayashi, K., Milner, J.J. (2013) Identification of the domains of cauliflower mosaic virus protein P6 responsible for suppression of RNA silencing and salicylic acid signalling Journal of General Virology, 94, pp. 2777-2789. (doi: 10.1099/vir.0.057729-0)

Chatzi, A., Sideris, D.P., Katrakili, N., Pozidis, C., Tokatlidis, K. (2013) Biogenesis of yeast Mia40 - uncoupling folding from import and atypical recognition features FEBS Journal, 280, pp. 4960-4969. (doi: 10.1111/febs.12482)

Wang, Y., Chen, Z., Zhang, B., Hills, A., Blatt, M. R. (2013) PYR/PYL/RCAR abscisic acid receptors regulate K⁺ and Cl^- channels through reactive oxygen species-mediated activation of Ca²⁺ channels at the plasma membrane of intact Arabidopsis guard cells. Plant Physiology, 163, pp. 566-577. (doi: 10.1104/pp.113.219758)

O'Hara, A., Jenkins, G.I. (2013) In vivo function of tryptophans in the Arabidopsis UV-B photoreceptor UVR8 Plant Cell, 24, pp. 3755-3766. (doi: 10.1105/tpc.112.101451)

Tokatlidis, K., Brown, G.C. (2013) Introduction: focus on mitochondria FEBS Journal, 280, pp. 4932. (doi: 10.1111/febs.12504)

Zhang, L., Risoul, V., Latifi, A., Christie, J.M., Zhang, C. (2013) Exploring the size limit of protein diffusion through the periplasm in cyanobacterium Anabaena sp. PCC 7120 using the 13 kDa iLOV fluorescent protein Research in Microbiology, 164, pp. 710-717. (doi: 10.1016/j.resmic.2013.05.004)

Blatt, M., Martin, C. (2013) Manipulation and misconduct in the handling of image data Plant Physiology, 163, pp. 3-4. (doi: 10.1104/pp.113.900471)

Symes, M.D., Cogdell, R.J., Cronin, L. (2013) Designing artificial photosynthetic devices using hybrid organic-inorganic modules based on polyoxometalates Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, 371, pp. 20110411. (doi: 10.1098/rsta.2011.0411)

Cogdell, R.J., Gardiner, A.T., Molina-Sanchez, P.I., Cronin, L. (2013) The use and misuse of photosynthesis in the quest for novel methods to harness solar energy to make fuel Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, 371, pp. 20110603. (doi: 10.1098/rsta.2011.0603)

Kunz, R., Timpmann, K., Southall, J., Cogdell, R.J., Freiberg, A., Köhler, J. (2013) Fluctuations in the electron-phonon coupling of a single chromoprotein Angewandte Chemie (International Edition), 52, pp. 8726-8730. (doi: 10.1002/anie.201303231)

Blatt, M. (2013) Plant Physiology welcomes its new topical reviews Plant Physiology, 162, pp. 1767. (doi: 10.1104/pp.113.900467)

Schlau-Cohen, G.S., Wang, Q., Southall, J., Cogdell, R.J., Moerner, W.E. (2013) Single-molecule spectroscopy reveals photosynthetic LH2 complexes switch between emissive states Proceedings of the National Academy of Sciences of the United States of America, 110, pp. 10899-10903. (doi: 10.1073/pnas.1310222110)

Seago, J., Juleff, N., Moffat, K., Berryman, S., Christie, J. M., Charleston, B., Jackson, T. (2013) An infectious recombinant foot-and-mouth disease virus expressing a fluorescent marker protein Journal of General Virology, 94, pp. 1517-1527. (doi: 10.1099/vir.0.052308-0)

Blatt, M. (2013) Associate Editor Graham Farquhar receives honors for his research in plant physiology and climate change Plant Physiology, 162, pp. 1213. (doi: 10.1104/pp.113.900466)

Takemiya, A., Sugiyama, N., Fujimoto, H., Tsutsumi, T., Yamauchi, S., Hiyama, A., Tada, Y., Christie, J.M., Shimazaki, K. (2013) Phosphorylation of BLUS1 kinase by phototropins is a primary step in stomatal opening Nature Communications, 4, (doi: 10.1038/ncomms3094)

Hildner, R., Brinks, D., Nieder, J.B., Cogdell, R.J., van Hulst, N.F. (2013) Quantum coherent energy transfer over varying pathways in single light-harvesting complexes Science, 340, pp. 1448-1451. (doi: 10.1126/science.1235820)

Spratt, D. E., Julio Martinez-Torres, R., Noh, Y. J., Mercier, P., Manczyk, N., Barber, K. R., Aguirre, J. D., Burchell, L., Purkiss, A., Walden, H., Shaw, G. S. (2013) A molecular explanation for the recessive nature of parkin-linked Parkinson’s disease Nature Communications, 4, (doi: 10.1038/ncomms2983)

Chatzi, A., Tokatlidis, K. (2013) The mitochondrial intermembrane space: a hub for oxidative folding linked to protein biogenesis Antioxidants and Redox Signaling, 19, pp. 54-62. (doi: 10.1089/ars.2012.4855)

Hussain, M., Wilson, J.B. (2013) EBNA1 Structure Function Relationships and Protein-protein Interactions

Ostroumov, E.E., Mulvaney, R.M., Cogdell, R.J., Scholes, G.D. (2013) Broadband 2D electronic spectroscopy reveals a carotenoid dark state in purple bacteria Science, 340, pp. 52-56. (doi: 10.1126/science.1230106)

Karnik, R., Grefen, C., Bayne, R., Honsbein, A., Kohler, T., Kioumourtzoglou, D., Williams, M., Bryant, N.J., Blatt, M.R. (2013) Arabidopsis Sec1/Munc18 protein SEC11 is a competitive and dynamic modulator of SNARE binding and SYP121-dependent vesicle traffic Plant Cell, 25, pp. 1368-1382. (doi: 10.1105/tpc.112.108506)

Hussain, M., Wilson, J.B. (2013) New paralogues and revised time line in the expansion of the vertebrate GH18 family Journal of Molecular Evolution, 76, pp. 240-260. (doi: 10.1007/s00239-013-9553-4)

Karnik, A., Karnik, R., Grefen, C. (2013) SDM-Assist software to design site-directed mutagenesis primers introducing “silent” restriction sites BMC Bioinformatics, 14, (doi: 10.1186/1471-2105-14-105)

Shani, E., Weinstain, R., Zhang, Y., Castillejo, C., Kaiserli, E., Chory, J., Tsien, R. Y., Estelle, M. (2013) Gibberellins accumulate in the elongating endodermal cells of Arabidopsis root Proceedings of the National Academy of Sciences of the United States of America, 110, pp. 4834-4839. (doi: 10.1073/pnas.1300436110)

Böhm, P.S., Southall, J., Cogdell, R.J., Köhler, J. (2013) Single-molecule spectroscopy on RC-LH1 complexes of rhodopseudomonas acidophilaStrain 10050 Journal of Physical Chemistry B, 117, pp. 3120-3126. (doi: 10.1021/jp4005218)

Banci, L., Bertini, I., Cefaro, C., Ciofi-Baffoni, S., Gajda, K., Felli, I.C., Gallo, A., Pavelkova, A., Kallergi, E., Andreadaki, M., Katrakili, N., Pozidis, C., Tokatlidis, K. (2013) An intrinsically disordered domain has a dual function coupled to compartment-dependent redox control Journal of Molecular Biology, 425, pp. 594-608. (doi: 10.1016/j.jmb.2012.11.032)

Hamatsu, J., O’Donovan, D., Tanaka, T., Shirai, T., Hourai, Y., Mikawa, T., Ikeya, T., Mishima, M., Boucher, W., Smith, B.O., Laue, E.D., Shirakawa, M., Ito, Y. (2013) High-resolution heteronuclear multidimensional NMR of proteins in living insect cells using a baculovirus protein expression system Journal of the American Chemical Society, 135, pp. 1688-1691. (doi: 10.1021/ja310928u)

Morales, L.O., Brosche, M., Vainonen, J., Jenkins, G.I., Wargent, J.J., Sipari, N., Strid, A., Lindfors, A.V., Tegelberg, R., Aphalo, P.J. (2013) Multiple roles for UV RESISTANCE LOCUS8 in regulating gene expression and metabolite accumulation in arabidopsis under solar ultraviolet radiation Plant Physiology, 161, pp. 744-759. (doi: 10.1104/pp.112.211375)

Blatt, M. R., Hills, A., Chen, Z./H., Wang, Y., Papanatsiou, M., Lew, V. L. (2013) The conceptual approach to quantitative modeling of guard cells Plant Signaling and Behavior, 8, pp. e22747. (doi: 10.4161/psb.22747)

Blatt, M. (2013) Plant Physiology plugged in Plant Physiology, 161, pp. 3-4. (doi: 10.1104/pp.112.900453)

Heilmann, M., Jenkins, G.I. (2013) Rapid reversion from monomer to dimer regenerates the ultraviolet-B photoreceptor UV RESISTANCE LOCUS8 in intact arabidopsis plants Plant Physiology, 161, pp. 547-555. (doi: 10.1104/pp.112.206805)

Christie, J.M., Murphy, A.S. (2013) Shoot phototropism in higher plants: new light through old concepts American Journal of Botany, 100, pp. 35-46. (doi: 10.3732/ajb.1200340)

Böhm, P.S., Kunz, R., Southall, J., Cogdell, R.J., Köhler, J. (2013) Does the reconstitution of RC-LH1 complexes from Rhodopseudomonas acidophilaStrain 10050 into a Phospholipid Bilayer yield the optimum environment for Optical spectroscopy? Journal of Physical Chemistry B, 117, pp. 15004-15013. (doi: 10.1021/jp409980k)

Tubasum, S., Camacho, R., Meyer, M., Yadav, D., Cogdell, R.J., Pullerits, T., Scheblykin, I.G. (2013) Evidence of excited state localization and static disorder in LH2 investigated by 2D-polarization single-molecule imaging at room temperature Physical Chemistry Chemical Physics, 15, pp. 19862-19869. (doi: 10.1039/c3cp52127c)

Kunz, R., Timpmann, K., Southall, J., Cogdell, R.J., Köhler, J.,, Freiberg, A. (2013) Fluorescence-excitation and emission spectra from LH2 antenna complexes of rhodopseudomonas acidophila as a function of the sample preparation conditions Journal of Physical Chemistry B, 117, pp. 12020-12029. (doi: 10.1021/jp4073697)

Marek, M.S., Buckup, T., Southall, J., Cogdell, R.J., Motzkus, M. (2013) Highlighting short-lived excited electronic states with pump-degenerate-four-wave-mixing Journal of Chemical Physics, 139, pp. 074202. (doi: 10.1063/1.4818164)

Colloms, S.D. (2013) Leucyl aminopeptidase PepA Academic Press

Henry, S.L., Cogdell, R.J. (2013) The evolution of the purple photosynthetic bacterial light-harvesting system Advances in Botanical Research, 66, pp. 205-226. (doi: 10.1016/B978-0-12-397923-0.00007-2)

Vance, S.J., McDonald, R.E., Cooper, A., Smith, B.O., Kennedy, M.W. (2013) The structure of latherin, a surfactant allergen protein from horse sweat and saliva Journal of the Royal Society: Interface, 10, pp. Art. 20130453. (doi: 10.1098/rsif.2013.0453)

Colloms, S.D. (2013) The topology of plasmid-monomerizing Xer site-specific recombination Biochemical Society Transactions, 41, pp. 589-594. (doi: 10.1042/BST20120340)

Kennedy, M.W., Córsico, B., Cooper, A., Smith, B.O. (2013) The unusual lipid-binding proteins of nematodes: NPAs, nemFABPs and FARs CABI; Wallingford; UK